Gene profile of  acrA and acrB efflux pump genes in multidrug-resistant clinical E. coli isolates

Authors

  • Dr mohamed Alshemrti Department of lab analysis faculty of science university of kufa
  • Jumana Nashid

DOI:

https://doi.org/10.36320/ajb/v18.i2.24099

Keywords:

Escherichia coli; Multidrug resistance; Efflux pumps; acrA and acrB genes; Clinical isolates

Abstract

Background & Objective: Antibiotic resistance in Escherichia coli is a major global challenge. This study aimed to evaluate the prevalence of two key genes, acrA and acrB, and investigate their association with antibiotic resistance patterns in various bacterial isolates.

Methods: A total of 71 E. coli isolates were collected and subjected to antibiotic susceptibility testing. Subsequently, PCR (Polymerase Chain Reaction) was performed to detect the presence of the acrA and acrB genes. Statistical analysis was then conducted to determine the correlation between these genes and the observed resistance phenotypes.

Results: The statistical analysis revealed a significant correlation between the acrA gene and three specific antibiotics (Aztreonam, Azithromycin, and Amikacin). Regarding the acrB gene, a significant statistical association was found with only two antibiotics: Colistin and Aztreonam. No significant correlation was observed with the remaining tested antibiotics.

Conclusion: The findings conclude that the AcrAB efflux pump system is directly involved in mediating resistance to Colistin, Aztreonam, Amikacin, and Azithromycin. Resistance to other antibiotic classes is likely attributed to alternative bacterial defense mechanisms, such as the production of beta-lactamases or alterations in membrane permeability (Porins).

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References

1. Blanco P, Hernando-Amado S, Reales-Calderon JA, Corona F, Lira F, Alcalde-Rico M, et al. Bacterial multidrug efflux pumps: much more than antibiotic resistance determinants. Microorganisms. 2016;4(1):14. doi:https://doi.org/10.3390/microorganisms4010014

2. Piddock LJ. Clinically relevant chromosomally encoded multidrug resistance efflux pumps in bacteria. Clinical microbiology reviews. 2006;19(2):382-402. doi:https://doi.org/10.1128/CMR.19.2.382-402.2006

3. Zgurskaya HI, Nikaido H. Multidrug resistance mechanisms: drug efflux across two membranes. Molecular microbiology. 2000;37(2):219-25. doi:https://doi.org/10.1046/j.1365-2958.2000.01974.x

4. White DG, Goldman JD, Demple B, Levy SB. Role of the acrAB locus in organic solvent tolerance mediated by expression of marA, soxS, or robA in Escherichia coli. J Bacteriol. 1997;179(19):6122-6.

. doi:https://doi.org/10.1128/jb.179.19.6122-6126.1997

5. Thanassi DG, Cheng LW, Nikaido H. Active efflux of bile salts by Escherichia coli. Journal of bacteriology. 1997;179(8):2512-8. doi:https://doi.org/10.1128/jb.179.8.2512-2518.1997https://doi.org/10.1128/jb.179.8.2512-2518.1997

6. Sulavik MC, Dazer M, Miller PF. The Salmonella typhimurium mar locus: molecular and genetic analyses and assessment of its role in virulence. Journal of bacteriology. 1997;179(6):1857-66. doi:https://doi.org/10.1128/jb.179.6.1857-1866.1997

7. Frère J-M, Rigali S. The alarming increase in antibiotic-resistant bacteria. Drug Target Rev. 2016;3(26-30.

8. Vogtländer NP, Van Kasteren ME, Natsch S, Kullberg B-J, Hekster YA, Van Der Meer JW. Improving the process of antibiotic therapy in daily practice: interventions to optimize timing, dosage adjustment to renal function, and switch therapy. Archives of internal medicine. 2004;164(11):1206-12. doi:https://doi.org/10.1001/archinte.164.11.1206

9. Blair JM, Richmond GE, Piddock LJ. Multidrug efflux pumps in Gram-negative bacteria and their role in antibiotic resistance. Future microbiology. 2014;9(10):1165-77. doi:https://doi.org/10.2217/fmb.14.92

10. Anes J, McCusker MP, Fanning S, Martins M. The ins and outs of RND efflux pumps in Escherichia coli. Frontiers in microbiology. 2015;6(587. doi:https://doi.org/10.3389/fmicb.2015.00587

11. Li X-Z, Plésiat P, Nikaido H. The challenge of efflux-mediated antibiotic resistance in Gram-negative bacteria. Clinical microbiology reviews. 2015;28(2):337-418. doi:https://doi.org/10.1128/CMR.00114-14

12. Adewoye L, Sutherland A, Srikumar R, Poole K. The mexR repressor of the mexAB-oprM multidrug efflux operon in Pseudomonas aeruginosa: characterization of mutations compromising activity. Journal of bacteriology. 2002;184(15):4308-12. doi:https://doi.org/10.1128/JB.184.15.4308-4312.2002

13. Wang H, Dzink-Fox JL, Chen M, Levy SB. Genetic characterization of highly fluoroquinolone-resistant clinical Escherichia coli strains from China: role of acrR mutations. Antimicrobial agents and chemotherapy. 2001;45(5):1515-21. doi:https://doi.org/10.1128/AAC.45.5.1515-1521.2001

14. Webber MA, Piddock LJ. Absence of mutations in marRAB or soxRS in acrB-overexpressing fluoroquinolone-resistant clinical and veterinary isolates of Escherichia coli. Antimicrobial agents and chemotherapy. 2001;45(5):1550-2. doi:https://doi.org/10.1128/AAC.45.5.1550-1552.2001

15. Alekshun MN, Levy SB. Regulation of chromosomally mediated multiple antibiotic resistance: the mar regulon. Antimicrobial agents and chemotherapy. 1997;41(10):2067-75. doi:https://doi.org/10.1128/AAC.41.10.2067

16. Pomposiello PJ, Demple B. Identification of SoxS-regulated genes in Salmonella enterica serovar Typhimurium. Journal of Bacteriology. 2000;182(1):23-9. doi:https://doi.org/10.1128/JB.182.1.23-29.2000

17. Cowan ST. Cowan and Steel's manual for the identification of medical bacteria: Cambridge university press; 1993.

18. Al-Shamarti MJ. Activity assessment of antibiotics used against different bacterial etiological agents of UTI in Najaf, Iraq. Iranian Journal of Pathology. 2024;19(3):348. doi:https://doi.org/10.30699/IJP.2024.2015383.3183

19. Wikler MA. Performance standards for antimicrobial susceptibility testing: Seventeenth informational supplement: Clinical and Laboratory Standards Institute; 2007.

20. Gawad WE, Helmy OM, Tawakkol WM, Hashem AM. Antimicrobial resistance, biofilm formation, and phylogenetic grouping of uropathogenic Escherichia coli isolates in Egypt: The role of efflux pump-mediated resistance. 2018;doi:https://doi.org/10.21608/ejmm.2018.285573

21. Paterson DL, Hujer KM, Hujer AM, Yeiser B, Bonomo MD, Rice LB, et al. Extended-spectrum β-lactamases in Klebsiella pneumoniae bloodstream isolates from seven countries: dominance and widespread prevalence of SHV-and CTX-M-type β-lactamases. Antimicrobial agents and chemotherapy. 2003;47(11):3554-60. doi:https://doi.org/10.1128/AAC.47.11.3554-3560.2003

22. Kömürlüoğlu A, Aykaç K, Özsürekçi Y, Başaranoğlu ST, Bıçakçıgil A, Liste Ü, et al. Gram negatif idrar yolu enfeksiyonu etkenlerinin antibiyotik direnç dağılımı: Tek merkez deneyimi. Turkish Journal of Pediatric Disease. 2018;12(1):10-7. doi:https://doi.org/10.12956/tjpd.2018.330

23. Cag Y, Haciseyitoglu D, Ozdemir AA, Cag Y. Antibiotic resistance and bacteria in urinary tract infections in pediatric patients. Medeniyet medical journal. 2021;36(3):217. doi:https://doi.org/10.5222/MMJ.2021.57947

24. Mihankhah A, Khoshbakht R, Raeisi M, Raeisi V. Prevalence and antibiotic resistance pattern of bacteria isolated from urinary tract infections in Northern Iran. Journal of research in medical sciences. 2017;22(1):108. doi:https://doi.org/10.4103/jrms.JRMS_890_16

25. Shah P, Swiatlo E. A multifaceted role for polyamines in bacterial pathogens. Molecular microbiology. 2008;68(1):4-16. doi:https://doi.org/10.1111/j.1365-2958.2008.06126.x

26. Dela Vega AL, Delcour AH. Polyamines decrease Escherichia coli outer membrane permeability. Journal of bacteriology. 1996;178(13):3715-21. doi:https://doi.org/10.1128/jb.178.13.3715-3721.1996

27. Iyer R, Wu Z, Woster PM, Delcour AH. Molecular basis for the polyamine-OmpF porin interactions: inhibitor and mutant studies. Journal of molecular biology. 2000;297(4):933-45. doi:https://doi.org/10.1006/jmbi.2000.3663

28. Nishino K, Yamaguchi A. Analysis of a complete library of putative drug transporter genes in Escherichia coli. Journal of bacteriology. 2001;183(20):5803-12. doi:https://doi.org/10.1128/JB.183.20.5803-5812.2001

29. Woolridge DP, Vazquez-Laslop N, Markham PN, Chevalier MS, Gerner EW,

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Published

2026-08-01

How to Cite

Alshemrti, D. mohamed, & Nashid , J. . (2026). Gene profile of  acrA and acrB efflux pump genes in multidrug-resistant clinical E. coli isolates. Al-Kufa University Journal for Biology, 18(2). https://doi.org/10.36320/ajb/v18.i2.24099

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